Run statistics ⓘ
| Measure | Value |
|---|---|
| Report name | Toulligqc-report-2024-09-15-233532 |
| Experiment group | FOVI_Krill_ligacion |
| Sample ID | Unknown |
| Run ID | 6db96fccf6bd43b2bae31aae44c07feb16d9e092 |
| Run date | Thu Sep 12 19:16:47 UTC-03:00 2024 |
| Run duration | 21h35m47s |
| Flowcell ID | FAZ98884 |
| Flowcell product code | FLO-MIN114 |
| Flowcell version | Unknown |
| Kit | Unknown |
| Sequencing kit | sqk-lsk114 |
| Barcode kits | Unknown |
| Selected speed (bps) | 400 |
| Sample frequency (Hz) | 5000 |
| Yield | 8.18G |
| Read count | 3,615,582 |
| N50 (bp) | 3,105 |
| L50 | 2,700,481 |
Device and software ⓘ
| Measure | Value |
|---|---|
| Device type | minion |
| Device ID | MN34306 |
| Device hostname | PC-Secuenciacion |
| Device OS | Windows 10.0.22631 |
| Distribution version | 24.06.5 |
| MinKNOW version | 6.0.8 |
| Basecaller name | Unknown |
| Basecaller version | Unknown |
| Basecaller analysis | 1d_basecalling |
| Basecalling date | Unknown |
| Model file | Unknown |
| Min qscore threshold | Unknown |
| ToulligQC version | 2.7.1 |
| All reads | Pass reads | Fail reads | Pass barcoded reads | Fail barcoded reads | |
|---|---|---|---|---|---|
| count | 3,615,582 | 3,395,326 | 220,256 | 1,952,120 | 113,768 |
| percent | 100.00 | 93.91 | 6.09 | 53.99 | 3.15 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 3,615,582 | 3,395,326 | 220,256 |
| mean | 2,263.30 | 2,249.14 | 2,481.63 |
| std | 2,442.33 | 1,655.56 | 7,457.58 |
| min | 1.00 | 1.00 | 1.00 |
| 25% | 1,407.00 | 1,409.00 | 1,083.00 |
| median | 1,460.00 | 1,459.00 | 1,522.00 |
| 75% | 3,107.00 | 3,108.00 | 3,006.00 |
| max | 1,149,525.00 | 371,694.00 | 1,149,525.00 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 3,615,582 | 3,395,326 | 220,256 |
| mean | 21.15 | 22.04 | 7.45 |
| std | 6.03 | 5.05 | 1.96 |
| min | 1.00 | 10.00 | 1.00 |
| 25% | 17.86 | 18.74 | 6.02 |
| median | 21.84 | 22.22 | 7.93 |
| 75% | 24.99 | 25.21 | 9.08 |
| max | 50.00 | 50.00 | 10.00 |
| Barcode arrangement (%) | Read count | Base count | |
|---|---|---|---|
| barcode01 | 12.67% | 430,057 | 516,831,324 |
| barcode06 | 7.64% | 259,560 | 362,829,847 |
| barcode08 | 5.97% | 202,865 | 270,587,144 |
| barcode10 | 5.97% | 202,759 | 291,232,445 |
| barcode11 | 3.57% | 121,162 | 142,306,408 |
| barcode12 | 7.35% | 249,573 | 320,928,517 |
| barcode13 | 14.32% | 486,141 | 549,311,827 |
| unclassified | 42.51% | 1,443,206 | 5,182,527,691 |
| barcode23 | 0.00% | 1 | 368 |
| barcode09 | 0.00% | 1 | 2,139 |
| barcode02 | 0.00% | 1 | 1,604 |
| other barcodes | 0.00% | 0 | 0 |
| Barcode arrangement (%) | Read count | Base count | |
|---|---|---|---|
| barcode01 | 9.68% | 21,318 | 32,524,671 |
| barcode06 | 8.07% | 17,775 | 35,264,857 |
| barcode08 | 4.77% | 10,500 | 20,667,462 |
| barcode10 | 6.04% | 13,312 | 27,409,797 |
| barcode11 | 4.02% | 8,848 | 17,393,660 |
| barcode12 | 6.80% | 14,972 | 28,310,937 |
| barcode13 | 12.28% | 27,040 | 39,204,189 |
| unclassified | 48.35% | 106,488 | 345,807,376 |
| barcode05 | 0.00% | 1 | 71 |
| barcode22 | 0.00% | 1 | 1,419 |
| barcode03 | 0.00% | 1 | 10,450 |
| other barcodes | 0.00% | 0 | 0 |