Run statistics ⓘ

MeasureValue
Report name Toulligqc-report-2024-09-15-233532
Experiment groupFOVI_Krill_ligacion
Sample IDUnknown
Run ID6db96fccf6bd43b2bae31aae44c07feb16d9e092
Run dateThu Sep 12 19:16:47 UTC-03:00 2024
Run duration 21h35m47s
Flowcell IDFAZ98884
Flowcell product codeFLO-MIN114
Flowcell versionUnknown
KitUnknown
Sequencing kitsqk-lsk114
Barcode kitsUnknown
Selected speed (bps)400
Sample frequency (Hz)5000
Yield8.18G
Read count3,615,582
N50 (bp)3,105
L502,700,481

Device and software ⓘ

MeasureValue
Device typeminion
Device IDMN34306
Device hostnamePC-Secuenciacion
Device OSWindows 10.0.22631
Distribution version24.06.5
MinKNOW version6.0.8
Basecaller nameUnknown
Basecaller versionUnknown
Basecaller analysis1d_basecalling
Basecalling dateUnknown
Model fileUnknown
Min qscore thresholdUnknown
ToulligQC version2.7.1
All reads Pass reads Fail reads Pass barcoded reads Fail barcoded reads
count 3,615,582 3,395,326 220,256 1,952,120 113,768
percent 100.00 93.91 6.09 53.99 3.15
All reads Pass reads Fail reads
count 3,615,582 3,395,326 220,256
mean 2,263.30 2,249.14 2,481.63
std 2,442.33 1,655.56 7,457.58
min 1.00 1.00 1.00
25% 1,407.00 1,409.00 1,083.00
median 1,460.00 1,459.00 1,522.00
75% 3,107.00 3,108.00 3,006.00
max 1,149,525.00 371,694.00 1,149,525.00
All reads Pass reads Fail reads
count 3,615,582 3,395,326 220,256
mean 21.15 22.04 7.45
std 6.03 5.05 1.96
min 1.00 10.00 1.00
25% 17.86 18.74 6.02
median 21.84 22.22 7.93
75% 24.99 25.21 9.08
max 50.00 50.00 10.00
Barcode arrangement (%) Read count Base count
barcode01 12.67% 430,057 516,831,324
barcode06 7.64% 259,560 362,829,847
barcode08 5.97% 202,865 270,587,144
barcode10 5.97% 202,759 291,232,445
barcode11 3.57% 121,162 142,306,408
barcode12 7.35% 249,573 320,928,517
barcode13 14.32% 486,141 549,311,827
unclassified 42.51% 1,443,206 5,182,527,691
barcode23 0.00% 1 368
barcode09 0.00% 1 2,139
barcode02 0.00% 1 1,604
other barcodes 0.00% 0 0
Barcode arrangement (%) Read count Base count
barcode01 9.68% 21,318 32,524,671
barcode06 8.07% 17,775 35,264,857
barcode08 4.77% 10,500 20,667,462
barcode10 6.04% 13,312 27,409,797
barcode11 4.02% 8,848 17,393,660
barcode12 6.80% 14,972 28,310,937
barcode13 12.28% 27,040 39,204,189
unclassified 48.35% 106,488 345,807,376
barcode05 0.00% 1 71
barcode22 0.00% 1 1,419
barcode03 0.00% 1 10,450
other barcodes 0.00% 0 0